Some Selected BioPack Sequences
ghnha parameters on 800
- sw = 10,000
- fold in D1 (2nd H1 dimension) with sw1 = 6,000
- decouple N15 with dm2 = nny and ddf2 = ccg
- use Watergate 3919 for H2O suppression
- decouple CA and CO
- d1 = 1 (shouldn’t it be 1.5?)
Processing with VNMR
- remove solvent with filter (e.g., ssfilter=350)
- left shift F1 frequency by -1200
- LP forward in F2 and zero fill to 128
- LP both forward and back in F1
- setlp1(128,64,2)
- check using 0,1,2,3 as 3rd parameter to see if back-LP is necessary
- lp = lp1 = lp2 = 0
gnoesyChsqc paramater for 800
- sw = sw1 = 10,000
- fold in F2 (C13 dimension) with sw2 = 5300
- recycle delay d1 = 0.75 (to keep H2O from recovering)
- nt = 16 ; ni => 64 ; ni2 = 32
- decouple C13 with dm = nnny and cccp using wurst80
- dof at 35ppm (set to value returned by dofcal(35))
- decouple N15 with dm2 = nyny and cccg
- dof2 at 119ppm
- Wet suppression in both Relax and Mix delays (shape = gauss)
Processing with VNMR
- left shift F1 frequency by -1200 (?)
- LP forward in F1
- LP forward and back in F2
- setlp2(64,32,3)
- suggested final size 1024 x 256 x 128
- solvent subtraction should be minimal (ss=~10)
- lp = lp1 = lp2 = 0; rp = 0 and adjust if necessary